StemSkills Lab
Nucleic Acids Modeling and Simulations
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Course sections

Section 1
Module (6 Months) Nucleic Acids MODELING & SIMULATION
1
Introduction to various sequence Databases: Protein Data Bank (PDB), Nucleic Acid Data Bank (NDB) RCSB, UNIPROT
2
Studying Sequence and 2D and 3D structure of DNA/RNA
3
Learning Visualization tools (Rasmol and Pymol)
4
Studying Various Motifs in RNA structures
5
Modeling 3D structure of DNA/RNA
6
Molecular Dynamics Simulations
7
Simulation using GROMACS
8
Analyzing Results
9
Writing Report

Module (6 Months) Nucleic Acids MODELING & SIMULATION

Molecular Dynamics Simulations

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Module (6 Months) Nucleic Acids MODELING & SIMULATION Modeling 3D structure of DNA/RNA
Complete
Module (6 Months) Nucleic Acids MODELING & SIMULATION Simulation using GROMACS
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