Synthesis, quantum mechanical calculations, molecular docking, Hirshfeld surface analysis and ADMET estimation studies - StemSkills Lab
Skip to content

Synthesis, quantum mechanical calculations, molecular docking, Hirshfeld surface analysis and ADMET estimation studies

SYNTHESIS, QUANTUM MECHANICAL CALCULATIONS, MOLECULAR DOCKING, HIRSHFELD SURFACE ANALYSIS AND ADMET ESTIMATION STUDIES

Abstract


Synthesis, crystallographic characterization, spectroscopic (FT-IR, UV-Vis, NMR) and density functional studies of (E)-3-(anthracene-10-yl)-1-(napthalen-1-yl)prop-2-en-1-one (3ANP) have been reported. The molecular structure obtained from single crystal X-ray diffraction method of the investigated compound was compared with theoretical values by DFT method at B3LYP with 6-311G(d,p) basis set. The 3ANP crystallizes in triclinic space group P1 with a = 8.3426(5), b = 10.4643(6), c = 11.3925(6). Hirshfeld surface analysis was performed to confirm the existence of intra- intermolecular and other interactions using Crystal Explorer. In addition to the optimized geometrical structure, molecular electrostatic potential (MEP), natural bond orbital (NBO) analysis, non-linear optical (NLO) property, HOMO, LUMO, mulliken population analysis have been investigated. The electronic properties of the compound were examined using TD-DFT calculations. The calculated vibrational frequencies have been compared with the experimental FT-IR values. Gauge invariant atomic orbital (GIAO) method was used to calculate 1H and 13C NMR chemical shifts in the ground state and was compared with the experimental NMR spectra. Further, the analysis using rules for drug-likeness and ADMET prediction revealed the druggability of the compound. Molecular docking showed the binding energy of -9.4 Kcal/mol and other interactions of 3ANP molecule with protein PDB ID: 1FCQ.


Read the Full Article on Elsevier

Think you know Molecular Docking?
Take the free StemSkills assessment and earn a verifiable certificate you can download and add to your LinkedIn profile.
Start the free assessment

Keep going

Structural Insights in Mammalian Sialyltransferases and Fucosyltransferases|Research Paper by StemSkill Lab Abstract Mammalian cell surfaces are modified with complex arrays of glycans that play major roles in health and… Immunoinformatics-Aided Design and In Vivo Validation of a Peptide-Based Multiepitope Vaccine Targeting Canine Circovirus Abstract Canine circovirus (CanineCV) is a deadly pathogen affecting both domestic and wild carnivores, including dogs. No vaccine… Immunoinformatics Aided Design | Peptide Based Multi-Epitope Vaccine of Dengue Virus | Research Paper by Stemskills Lab Abstract Dengue virus (DENV) is an arboviral disease affecting more than 400 million people annually. Only a single vaccine…
See live workshops