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Molecular Modeling
How to Analyze Protein-Ligand Interactions Over an MD Trajectory (ProLIF and MDAnalysis, Step by Step)
Compute which binding-site residues held your ligand and for what percentage of the run, using ProLIF and MDAnalysis on a PBC-corrected GROMACS…
DA
Dr. Abdul Rajjak Shaikh
·
11 min read
August 22, 2026
Updated
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