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Molecular Modeling
How to Define the Simulation Box in GROMACS with gmx editconf (Cubic vs Dodecahedron): A Step-by-Step Guide
Set your GROMACS simulation box with gmx editconf. Choose cubic or dodecahedron, pick the right -d distance, and cut roughly 29 percent…
DA
Dr. Abdul Rajjak Shaikh
·
13 min read
August 6, 2026
Updated
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